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  5. Pnu_g25536

Pnu_g25536 (STR16)


Aliases : STR16

Description : not classified & original description: none


Gene families : OG0001828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25536
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Als_g08244 STR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20466 STR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35286 SEN1, ATSEN1, DIN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02219 STR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002334001 SEN1, ATSEN1, DIN1 Rhodanese-like domain-containing protein 15,... 0.03 OrthoFinder output from all 47 species
GSVIVT01006533001 No alias No description available 0.02 OrthoFinder output from all 47 species
Nbi_g11682 STR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17157 STR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13334 No alias arsenate reductase *(HAC1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 84 162
No external refs found!