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  5. Pnu_g25155

Pnu_g25155


Description : not classified & original description: none


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25155
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Adi_g007953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25349 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0018.g014787 No alias not classified & original description: CDS=73-369 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023662 No alias not classified & original description: CDS=24-455 0.03 OrthoFinder output from all 47 species
Ceric.13G075900.1 Ceric.13G075900 not classified & original description: pacid=50635895... 0.07 OrthoFinder output from all 47 species
Dac_g27435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g20930.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g03240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22383 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 231 273
No external refs found!