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  5. Pnu_g25136

Pnu_g25136 (ADC1, ARGDC, ARGDC1, SPE1)


Aliases : ADC1, ARGDC, ARGDC1, SPE1

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25136
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00026140 ADC2, SPE2,... Polyamine... 0.03 OrthoFinder output from all 47 species
AT2G16500 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase 1 0.03 OrthoFinder output from all 47 species
Aspi01Gene64047.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69293.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z147000.1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g40129 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04009 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03336 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33380 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58596 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 123 376
No external refs found!