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  5. Pnu_g24999

Pnu_g24999 (SIP2, AtSIP2)


Aliases : SIP2, AtSIP2

Description : alkaline alpha-galactosidase *(SIP2) & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g24999

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
Ala_g12692 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g666334 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.02 OrthoFinder output from all 47 species
GSVIVT01034980001 AtSTS, STS Stachyose synthase OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_07183 AtSTS, STS stachyose synthase 0.07 OrthoFinder output from all 47 species
MA_5428g0020 DIN10 galactinol-sucrose galactosyltransferase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023485 SIP2, AtSIP2 not classified & original description: CDS=1-2646 0.05 OrthoFinder output from all 47 species
Sam_g23129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g086530.4.1 SIP1, Solyc02g086530 raffinose synthase 0.07 OrthoFinder output from all 47 species
Tin_g25138 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 181 944
No external refs found!