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  5. Pnu_g24579

Pnu_g24579 (LOF2, MYB105, ATMYB105)


Aliases : LOF2, MYB105, ATMYB105

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g24579
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00169630 MYB73, ATMYB73,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 OrthoFinder output from all 47 species
AT2G23290 MYB70, AtMYB70 myb domain protein 70 0.05 OrthoFinder output from all 47 species
AT3G50060 MYB77 myb domain protein 77 0.04 OrthoFinder output from all 47 species
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.04 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 OrthoFinder output from all 47 species
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.05 OrthoFinder output from all 47 species
Adi_g020716 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aev_g01523 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g15721 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aop_g08938 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54281.t2 AtMYB109,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63601.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010866 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s1025.g095454 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: CDS=1-468 0.03 OrthoFinder output from all 47 species
Cba_g03902 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g39034 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.19G007400.1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dac_g10100 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.06 OrthoFinder output from all 47 species
Ehy_g05817 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g09643 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g12904 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g12960 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g17909 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000219001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01009566001 MYB70, AtMYB70 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01020038001 MYB88, AtMYB88 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_24073 MYB77 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g16810.1 LOF2, MYB105,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09480.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g28320.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33800.1 LOF2, MYB105,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Lfl_g28242 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Msp_g11561 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Nbi_g44161 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g13295 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g20759 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ore_g22011 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g27825 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g65999 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pnu_g08075 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.07 OrthoFinder output from all 47 species
Pnu_g08134 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12037 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g24702 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ppi_g12324 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000153 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g064540.4.1 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g078420.1.1 MYB73, ATMYB73,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Tin_g19510 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g24569 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e013910_P001 MYB77, Zm00001e013910 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e018471_P001 MYB73, ATMYB73,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e030480_P001 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e037510_P001 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 192 235
IPR001005 SANT/Myb 140 186
No external refs found!