Pnu_g23555 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23555

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107292 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18096 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65846.t1 OSB3, Aspi01Gene65846 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011663 No alias not classified & original description: CDS=1-3036 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Azfi_s1423.g102903 No alias not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Cba_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07018 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07727 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20876 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.02 OrthoFinder output from all 47 species
Ceric.20G069700.1 REME1, Ceric.20G069700 not classified & original description: pacid=50567174... 0.03 OrthoFinder output from all 47 species
Ceric.34G043400.1 Ceric.34G043400 not classified & original description: pacid=50623137... 0.03 OrthoFinder output from all 47 species
Dac_g00755 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18287 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28478 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04874 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46783 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_82595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58725 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15317 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05927 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009138 No alias component *(NRPC16/RPC34) of TFIIIe transcription factor... 0.03 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc02g014360.3.1 LOI1, MEF11,... RNA editing factor (MEF11) 0.02 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26726 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30432 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44238 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001200_P001 Zm00001e001200 Pentatricopeptide repeat-containing protein At5g59600... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 278 340
IPR002885 Pentatricopeptide_repeat 135 160
IPR002885 Pentatricopeptide_repeat 161 207
IPR002885 Pentatricopeptide_repeat 60 106
No external refs found!