MA_86877g0010


Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1 (EXPA1)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_86877g0010
Cluster HCCA cluster: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 Gene family
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.04 Gene family
AT4G38210 ATEXPA20,... expansin A20 0.02 Gene family
AT5G39300 ATEXPA25,... expansin A25 0.02 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
GSVIVT01024572001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01024946001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
GSVIVT01028215001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01032935001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g21820 Os03g0336400 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g25990 Os03g0377100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os05g19570 Os05g0276500 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_10433559g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo174522 PACid_15418434 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Smo409954 PACid_15406290 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc04g081870.3.1 Solyc04g081870.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc06g005560.3.1 Solyc06g005560.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc10g086520.2.1 Solyc10g086520.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
Zm00001d032885 GRMZM2G115909 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035109 GRMZM2G303937 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035112 GRMZM2G019398 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d040379 GRMZM2G149605 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 40 117
IPR007117 Expansin_CBD 128 204
No external refs found!