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  5. Pnu_g21616

Pnu_g21616


Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g21616
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
Als_g15665 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11705 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57219.t1 Aspi01Gene57219 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G046800.1 ERD4, Ceric.10G046800 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
GSVIVT01021562001 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.04 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_125601g0010 ERD4 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
MA_78696g0010 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Mp5g05890.1 HYP1, ATHYP1 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Nbi_g17620 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012943 ERD4 calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Spa_g11165 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011518_P001 ERD4, Zm00001e011518 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 7 179
IPR003864 CSC1/OSCA1-like_7TM 373 645
IPR027815 CSC1/OSCA1-like_cyt 200 362
No external refs found!