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  5. Pnu_g20609

Pnu_g20609 (NF-YB3)


Aliases : NF-YB3

Description : component *(NF-YB) of NF-Y transcription factor complex & original description: none


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20609
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene16041.t1 NF-YB6, L1L,... transcription factor *(LEC) involved in seed maturation... 0.04 OrthoFinder output from all 47 species
Cba_g22989 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Ehy_g00518 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01010959001 NF-YB5 RNA biosynthesis.transcriptional activation.NF-Y... 0.06 OrthoFinder output from all 47 species
GSVIVT01014689001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Solyc01g067130.4.1 NF-YB5, Solyc01g067130 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Solyc09g074760.1.1 NF-YB5, Solyc09g074760 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 67 131
No external refs found!