Pnu_g20520


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20520

Target Alias Description ECC score Gene Family Method Actions
AT2G44340 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
AT3G58000 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g015010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37551.t1 Aspi01Gene37551 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72262.t1 Aspi01Gene72262 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.05 OrthoFinder output from all 47 species
Ceric.10G025800.1 Ceric.10G025800 not classified & original description: pacid=50611640... 0.04 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.04 OrthoFinder output from all 47 species
Ceric.14G098600.1 Ceric.14G098600 not classified & original description: pacid=50634320... 0.03 OrthoFinder output from all 47 species
Ceric.18G046300.1 Ceric.18G046300 not classified & original description: pacid=50621121... 0.03 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.04 OrthoFinder output from all 47 species
Ceric.26G063300.1 Ceric.26G063300 not classified & original description: pacid=50599964... 0.03 OrthoFinder output from all 47 species
Dac_g07235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g57030.1 LOC_Os04g57030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10430605g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_122594g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_183879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001904 No alias not classified & original description: CDS=1-351 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010042 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sam_g21934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24720 No alias WRKY33-activaTing protein *(SIB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006627_P001 Zm00001e006627 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!