Pnu_g20089

Description : not classified & original description: none

Gene families : OG0006520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006520_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g20089

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	None	Extended
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008649	rRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016436	rRNA (uridine) methyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0031167	rRNA methylation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEA	Interproscan
BP	GO:0070475	rRNA base methylation	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140102	catalytic activity, acting on a rRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041367	Znf-CCCH_4	752	772
IPR000571	Znf_CCCH	724	745
IPR019446	BMT5-like	816	975
IPR001650	Helicase_C	266	384

External Links

No external refs found!

Pnu_g20089

Expression Profile

Co-expression Networks

Functional Annotation