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  5. Pnu_g19964

Pnu_g19964


Description : AHL clade-A transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19964
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Ore_g14039 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28223 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05346 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17799 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019540 AHL22 AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Smo67842 AHL19 AT-hook motif nuclear-localized protein 19... 0.04 OrthoFinder output from all 47 species
Solyc09g089620.1.1 AHL20, Solyc09g089620 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0009712 catechol-containing compound metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0018576 catechol 1,2-dioxygenase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019114 catechol dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 94 206
No external refs found!