1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g19930

Pnu_g19930 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : non-photochemical quenching PsbS protein & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19930
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00154940 NPQ4, PSBS,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT1G44575 NPQ4, PSBS Chlorophyll A-B binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g083731 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.08 OrthoFinder output from all 47 species
Adi_g083732 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Adi_g083733 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Aev_g49065 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Ala_g13911 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Als_g10582 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Aob_g25558 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Aob_g38592 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000408 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0314.g064232 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Cba_g01831 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Dac_g26756 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Dcu_g00800 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species
Ehy_g06548 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008866001 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64960.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.05 OrthoFinder output from all 47 species
Len_g07934 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Lfl_g30875 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Nbi_g04085 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.06 OrthoFinder output from all 47 species
Ore_g05767 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.07 OrthoFinder output from all 47 species
Ore_g31160 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Ore_g32353 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Ppi_g02820 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48261 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020617 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Solyc06g060340.3.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.03 OrthoFinder output from all 47 species
Spa_g17275 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Tin_g11495 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019137_P001 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001897 cytolysis by symbiont of host cells IEP HCCA
BP GO:0001907 killing by symbiont of host cells IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019836 hemolysis by symbiont of host erythrocytes IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 97 225
No external refs found!