Pnu_g19671 (ATCSTF77, CSTF77)


Aliases : ATCSTF77, CSTF77

Description : component *(CstF77/Rna14) of Cleavage Stimulatory Factor (CstF) complex & original description: none


Gene families : OG0004932 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004932_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19671
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.68 ATCSTF77, CSTF77 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.01 OrthoFinder output from all 47 species
Lfl_g02187 ATCSTF77, CSTF77 component *(CstF77/Rna14) of Cleavage Stimulatory Factor... 0.02 OrthoFinder output from all 47 species
Nbi_g11594 ATCSTF77, CSTF77 component *(CstF77/Rna14) of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR008847 Suf 403 639
No external refs found!