1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g19392

Pnu_g19392 (ECT5)


Aliases : ECT5

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19392

Target Alias Description ECC score Gene Family Method Actions
Adi_g045720 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36173 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10945 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G077700.1 ECT7, Ceric.19G077700 methylation reader *(ECT) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000806.40 ECT8 No description available 0.01 OrthoFinder output from all 47 species
Dac_g10650 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23395 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38717 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20647 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g20180.2 ECT7, LOC_Os03g20180 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44200.1 ECT5, LOC_Os08g44200 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
MA_9124859g0010 ECT5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g35611 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24503 ECT10 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13990 No alias methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41432 ECT6 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 420 560
No external refs found!