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  5. Pnu_g19331

Pnu_g19331


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19331
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01025747001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01032789001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Len_g18408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_65818g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e009812_P001 Zm00001e009812 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e016455_P001 BHLH32, ATAIG1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 204 250
No external refs found!