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  5. Pnu_g19238

Pnu_g19238 (TWN3, RPS9)


Aliases : TWN3, RPS9

Description : not classified & original description: none


Gene families : OG0002624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19238
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Ala_g09988 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g10959 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Dac_g14878 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g06113 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g12612 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g04376 TWN3, RPS9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g55930.1 TWN3, RPS9,... component psRPS9 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Lfl_g06364 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp3g01740.1 TWN3, RPS9 component psRPS9 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g00484 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Spa_g04655 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g04656 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g00437 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e005809_P002 TWN3, RPS9,... component psRPS9 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 93 214
No external refs found!