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  5. Pnu_g18442

Pnu_g18442


Description : mannan synthesis accessory protein *(MSR) & original description: none


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18442
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G21190 No alias O-fucosyltransferase family protein 0.06 OrthoFinder output from all 47 species
Adi_g014962 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Adi_g014963 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Adi_g056219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g103953 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Aev_g07781 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01824 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Ala_g36936 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Als_g04935 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Als_g23140 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Als_g30862 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene56083.t1 Aspi01Gene56083 mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61945.t1 Aspi01Gene61945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61949.t1 Aspi01Gene61949 mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015587 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06387 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g35690 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Dde_g21485 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Ehy_g06726 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g08327 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20020 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01016156001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.05 OrthoFinder output from all 47 species
Gb_29818 No alias mannan synthesis accessory protein 0.07 OrthoFinder output from all 47 species
Len_g01258 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Len_g16206 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Lfl_g06050 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
MA_24566g0010 No alias mannan synthesis accessory protein 0.05 OrthoFinder output from all 47 species
MA_76208g0010 No alias mannan synthesis accessory protein 0.03 OrthoFinder output from all 47 species
Msp_g05690 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Msp_g44602 No alias mannan synthesis accessory protein *(MSR) & original... 0.09 OrthoFinder output from all 47 species
Nbi_g02963 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g43787 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10269 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Pir_g57055 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g33079 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Solyc06g063240.3.1 Solyc06g063240 mannan synthesis accessory protein 0.07 OrthoFinder output from all 47 species
Spa_g18257 No alias mannan synthesis accessory protein *(MSR) & original... 0.1 OrthoFinder output from all 47 species
Tin_g09821 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10286 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 100 389
No external refs found!