MA_778985g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_778985g0010
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
LOC_Os04g41120 Os04g0488200 No description available 0.02 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.02 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc09g010070.1.1 Solyc09g010070.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 186 210
IPR002885 Pentatricopeptide_repeat 387 410
IPR002885 Pentatricopeptide_repeat 488 513
IPR002885 Pentatricopeptide_repeat 654 683
IPR002885 Pentatricopeptide_repeat 84 107
IPR002885 Pentatricopeptide_repeat 10 55
IPR002885 Pentatricopeptide_repeat 312 359
IPR002885 Pentatricopeptide_repeat 414 460
IPR002885 Pentatricopeptide_repeat 110 157
IPR002885 Pentatricopeptide_repeat 514 560
IPR002885 Pentatricopeptide_repeat 211 258
IPR032867 DYW_dom 686 780
No external refs found!