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  5. Pnu_g17900

Pnu_g17900


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001997_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17900
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Adi_g008023 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07760 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G002300.1 Ceric.27G002300 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Mp1g11180.1 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g09318 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 391 463
IPR000490 Glyco_hydro_17 34 333
No external refs found!