Pnu_g17826 (KNAT3)

Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g17826
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00264520	KNAT7, IXR11,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00169620	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AMTR_s00085p00165180	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Adi_g017501	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g23513	KNAT5	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0022.g016023	KNAT6, KNAT6L, KNAT6S	not classified & original description: CDS=247-1020	0.03	OrthoFinder output from all 47 species
Azfi_s2342.g110698	BUM1, SHL, STM,...	KNOX-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
GSVIVT01012897001	KNAT3	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01013790001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01030488001	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01031241001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
LOC_Os03g47016.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os08g19650.1	KNAT3, LOC_Os08g19650	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Ore_g16534	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g31221	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001775	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1104	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019792	KNAT7, IXR11	not classified & original description: CDS=1-462	0.03	OrthoFinder output from all 47 species
Sam_g36645	No alias	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	315	362
IPR005540	KNOX1	254	295
IPR005539	ELK_dom	420	441
IPR008422	Homeobox_KN_domain	460	499

External Links

No external refs found!

Pnu_g17826 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation