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  5. Pnu_g17807

Pnu_g17807


Description : not classified & original description: none


Gene families : OG0007462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17807
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Dac_g11861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007789 DUF688 279 329
No external refs found!