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Description : RNA splicing regulator *(NSR) & original description: none
Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g17439 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g128678 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g00631 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30804 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g39765 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g17260 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g41927 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15301 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000655.35 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| MA_10436362g0020 | No alias | NSR RNA splicing regulator | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07293 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07294 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10153 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g052145.1.1 | Solyc06g052145 | NSR RNA splicing regulator | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06435 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24886 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14155 | No alias | RNA splicing regulator *(NSR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024672_P001 | Zm00001e024672 | NSR RNA splicing regulator | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 199 | 268 |
| No external refs found! |