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  5. Pnu_g17370

Pnu_g17370 (SLY1)


Aliases : SLY1

Description : substrate adaptor of SCF E3 ubiquitin ligase *(SLY) & original description: none


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17370
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G44326 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Adi_g022605 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.05 OrthoFinder output from all 47 species
Aev_g16096 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g07109 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24799.t1 Aspi01Gene24799 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Ceric.05G080600.1 Ceric.05G080600 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Dcu_g11655 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_11568 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Gb_22367 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33240.1 LOC_Os02g33240 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g05660.1 LOC_Os11g05660 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g10650 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
MA_107408g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119267g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.01 OrthoFinder output from all 47 species
MA_17981g0010 SLY1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_196364g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_3236g0010 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g06600.1 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.01 OrthoFinder output from all 47 species
Mp5g06150.1 No alias SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
Ore_g03590 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g06355 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.01 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.07 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g28804 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g32241 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Tin_g03889 No alias substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014934_P001 SLY1, Zm00001e014934 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
Zm00001e022823_P002 SLY1, Zm00001e022823 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 58 99
No external refs found!