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  5. Pnu_g17288

Pnu_g17288


Description : Sar1-GTPase-regulating protein *(Sec16) & original description: none


Gene families : OG0001407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17288
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
AT5G47480 No alias RGPR-related 0.03 OrthoFinder output from all 47 species
Aev_g18515 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62034.t2 Aspi01Gene62034 Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Dac_g22532 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g01490.1 LOC_Os02g01490 Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
MA_40905g0010 NAT2, AAP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13522 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Msp_g13550 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g03220 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Ore_g08909 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Smo441538 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc08g007360.3.1 Solyc08g007360 Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
Zm00001e013404_P001 Zm00001e013404 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 974 1263
IPR024340 Sec16_CCD 783 910
No external refs found!