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  5. Pnu_g16656

Pnu_g16656 (FPA)


Aliases : FPA

Description : regulatory protein *(FPA) of TNL-mediated effector-triggered immunity & original description: none


Gene families : OG0001767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16656
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cba_g11671 FPA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G071600.1 FPA, Ceric.02G071600 not classified & original description: pacid=50585597... 0.03 OrthoFinder output from all 47 species
Dcu_g09580 FPA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19678 FPA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54142 FPA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034721_P001 FPA, Zm00001e034721 Flowering time control protein FPA OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012921 SPOC_C 608 719
IPR000504 RRM_dom 141 205
IPR000504 RRM_dom 64 127
IPR000504 RRM_dom 294 345
No external refs found!