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  5. Als_g63176

Als_g63176


Description : not classified & original description: none


Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g63176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
Adi_g012033 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aob_g21500 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65117.t1 Aspi01Gene65117 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.16G048200.1 HB-1, Ceric.16G048200 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Cre03.g174500 No alias Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01020605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
GSVIVT01021113001 HB-1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g48180.1 LOC_Os01g48180 HOX-like transcription factor 0.02 OrthoFinder output from all 47 species
MA_2434g0010 No alias HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
Ppi_g18955 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g25993 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g50552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08425 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Zm00001e006057_P001 Zm00001e006057 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028032_P001 Zm00001e028032 HOX-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!