Als_g62805 (ATROPGEF1, ROPGEF1)

Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none

Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g62805

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00182400	ATROPGEF1,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71966.t1	ATROPGEF1,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Aspi01Gene72310.t1	ROPGEF7,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01023897001	ATROPGEF1, ROPGEF1	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
LOC_Os05g48640.1	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
LOC_Os09g37270.1	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Msp_g08115	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Solyc01g111930.4.1	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.05	OrthoFinder output from all 47 species
Solyc09g011480.3.1	ROPGEF7,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
Spa_g30949	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Zm00001e010284_P002	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e015569_P002	ROPGEF14,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Zm00001e034952_P003	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Zm00001e034978_P001	ROPGEF3,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	130	496

External Links

No external refs found!

Als_g62805 (ATROPGEF1, ROPGEF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation