Als_g60846


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g60846

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species
Adi_g003314 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005790 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081792 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34817 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24134 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07955 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36681 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34788.t1 CRK8, Aspi01Gene34788 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65595.t1 Aspi01Gene65595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67653.t1 Aspi01Gene67653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016136 No alias not classified & original description: CDS=1-2217 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031009 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2424 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038704 No alias not classified & original description: CDS=1-2661 0.04 OrthoFinder output from all 47 species
Azfi_s0158.g053860 CRR2 not classified & original description: CDS=1-978 0.03 OrthoFinder output from all 47 species
Azfi_s0233.g059378 No alias not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Cba_g05310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16998 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67470 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G054700.1 Ceric.02G054700 not classified & original description: pacid=50584211... 0.03 OrthoFinder output from all 47 species
Ceric.04G018200.1 OTP84, Ceric.04G018200 not classified & original description: pacid=50630783... 0.03 OrthoFinder output from all 47 species
Ceric.06G034400.1 Ceric.06G034400 not classified & original description: pacid=50619664... 0.03 OrthoFinder output from all 47 species
Ceric.13G050400.1 Ceric.13G050400 not classified & original description: pacid=50636404... 0.03 OrthoFinder output from all 47 species
Ceric.14G059200.1 Ceric.14G059200 not classified & original description: pacid=50634117... 0.03 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.03 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.04 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50838 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04371 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20970 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
Gb_07336 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_21443 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
Len_g02415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_3317g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g03543 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10883 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09062 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35953 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62708 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013713 EMB2758 not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g21461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo110549 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc01g081290.4.1 Solyc01g081290 protein kinase (PEPRK) 0.03 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!