1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g59368

Als_g59368 (FAS4, ATFAS4)


Aliases : FAS4, ATFAS4

Description : not classified & original description: none


Gene families : OG0005211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g59368
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Lfl_g27239 FAS4, ATFAS4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09770 FAS4, ATFAS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 570 739
IPR001650 Helicase_C 942 1036
IPR007502 Helicase-assoc_dom 1098 1235
No external refs found!