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Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none
Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G76380 | No alias | DNA-binding bromodomain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113319 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08601 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08054 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene71841.t1 | Aspi01Gene71841 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72686.t1 | Aspi01Gene72686 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G032800.1 | Ceric.15G032800 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.20G005700.1 | Ceric.20G005700 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G070400.1 | Ceric.29G070400 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g03870.1 | LOC_Os03g03870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428440g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_131191g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g15890.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g15940.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g34665 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g41800 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g60712 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g41680 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0019902 | phosphatase binding | IEP | HCCA |
| MF | GO:0019903 | protein phosphatase binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001487 | Bromodomain | 345 | 426 |
| No external refs found! |