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  5. Als_g55267

Als_g55267 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g55267
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70268.t1 BAT1, Aspi01Gene70268 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70269.t1 BAT1, Aspi01Gene70269 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Cre04.g226150 BAT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Ehy_g10638 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Len_g18023 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g11413 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Tin_g09092 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 45 368
No external refs found!