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  5. Als_g52368

Als_g52368 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g52368

Target Alias Description ECC score Gene Family Method Actions
AT2G38360 PRA1.B4 prenylated RAB acceptor 1.B4 0.02 OrthoFinder output from all 47 species
AT3G56110 PRA1.B1 prenylated RAB acceptor 1.B1 0.02 OrthoFinder output from all 47 species
AT5G01640 PRA1.B5 prenylated RAB acceptor 1.B5 0.02 OrthoFinder output from all 47 species
Azfi_s0473.g072972 PRA1.B1 not classified & original description: CDS=1-327 0.03 OrthoFinder output from all 47 species
Ceric.31G034000.1 PRA1.B5, Ceric.31G034000 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58410.1 PRA1.E, LOC_Os03g58410 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Len_g00355 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025049 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-630 0.03 OrthoFinder output from all 47 species
Sam_g52062 No alias B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g097230.4.1 PRA1.E, Solyc01g097230 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 57 195
No external refs found!