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  5. Als_g51667

Als_g51667 (AtOCT4, 4-Oct)


Aliases : AtOCT4, 4-Oct

Description : organic cation transporter *(OCT) & original description: none


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g51667

Target Alias Description ECC score Gene Family Method Actions
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.03 OrthoFinder output from all 47 species
Aop_g70561 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58798.t1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G085500.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
Gb_11984 AtOCT1, 1-Oct organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Gb_31020 AtOCT1, 1-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g22710.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37454.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37510.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Lfl_g17005 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g063930.4.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Solyc10g074850.3.1 3-Oct, ATOCT3,... Organic cation/carnitine transporter 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041723_P001 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 137 592
No external refs found!