Als_g50127


Description : not classified & original description: none


Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50127

Target Alias Description ECC score Gene Family Method Actions
AT1G11070 No alias BEST Arabidopsis thaliana protein match is:... 0.04 OrthoFinder output from all 47 species
Adi_g011448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31499 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09707 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene03298.t1 Aspi01Gene03298 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0880.g091021 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Cba_g14544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G012800.1 Ceric.16G012800 not classified & original description: pacid=50590071... 0.03 OrthoFinder output from all 47 species
Dac_g21176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007118001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030542001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_27159 No alias Uncharacterized protein At4g04980 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g09353 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g59211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05879 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43167 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g01327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011181 No alias not classified & original description: CDS=1-2319 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025036 No alias not classified & original description: CDS=1-2685 0.05 OrthoFinder output from all 47 species
Sam_g51854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05626 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e023658_P001 Zm00001e023658 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!