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  5. Als_g50081

Als_g50081


Description : not classified & original description: none


Gene families : OG0001725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g50081

Target Alias Description ECC score Gene Family Method Actions
AT5G23680 No alias Sterile alpha motif (SAM) domain-containing protein 0.02 OrthoFinder output from all 47 species
Als_g04933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_83723g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g05737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023494 No alias not classified & original description: CDS=1-1170 0.03 OrthoFinder output from all 47 species
Spa_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001660 SAM 292 350
No external refs found!