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  5. Als_g49597

Als_g49597 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g49597
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00105470 AMY3, ATAMY3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Aev_g12545 AMY1, ATAMY1 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15129 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18360 AMY3, ATAMY3 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13965.t1 AMY3, ATAMY3,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13966.t1 AMY3, ATAMY3,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08616 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_336273g0010 AMY1, ATAMY1 alpha amylase 0.03 OrthoFinder output from all 47 species
Msp_g00704 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003998 AMY3, ATAMY3 alpha amylase & original description: CDS=136-3117 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019864 AMY3, ATAMY3 alpha amylase & original description: CDS=226-6474 0.03 OrthoFinder output from all 47 species
Sam_g16056 No alias alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47997 AMY3, ATAMY3 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 25 275
No external refs found!