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  5. Als_g48003

Als_g48003 (FIB)


Aliases : FIB

Description : Fibrillin plastoglobule core protein *(FBN1/2) & original description: none


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g48003
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT4G04020 FIB fibrillin 0.02 OrthoFinder output from all 47 species
Msp_g09485 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ppi_g62338 No alias Fibrillin plastoglobule core protein *(FBN8) & original... 0.02 OrthoFinder output from all 47 species
Smo163532 No alias Plastid lipid-associated protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc08g076480.3.1 Solyc08g076480 Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 104 319
No external refs found!