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  5. Als_g47972

Als_g47972 (GAE1)


Aliases : GAE1

Description : UDP-D-glucuronic acid 4-epimerase & original description: none


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47972
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00257170 GAE6,... Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00132110 GAE1,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Aev_g12135 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g37648 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05460 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04214 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19266.t1 GAE1, Aspi01Gene19266 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53433.t1 GAE1, Aspi01Gene53433 UDP-D-glucuronic acid 4-epimerase & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0157.g053795 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Cba_g21857 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01502 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13114 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g14540.1 GAE2, LOC_Os03g14540 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
LOC_Os08g41440.1 GAE6, LOC_Os08g41440 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
LOC_Os09g32670.1 GAE6, LOC_Os09g32670 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Len_g46971 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.07 OrthoFinder output from all 47 species
MA_8899718g0010 GAE3 UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp2g22600.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Mp5g05540.1 GAE4 UDP-D-glucuronic acid 4-epimerase 0.01 OrthoFinder output from all 47 species
Mp7g08710.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Msp_g07788 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48023 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g12652 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18487 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38573 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09520 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31913 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007075 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023539 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.02 OrthoFinder output from all 47 species
Spa_g14885 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05525 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016096_P001 GAE1, Zm00001e016096 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 172 491
No external refs found!