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  5. Als_g47792

Als_g47792


Description : not classified & original description: none


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47792
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT1G63220 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.6 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.10 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre06.g305750 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01304 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g01822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g23534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14882 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 130 219
IPR000008 C2_dom 4 98
No external refs found!