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  5. Als_g47026

Als_g47026


Description : not classified & original description: none


Gene families : OG0004907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g47026
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00247820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G52110 No alias unknown protein; Has 191 Blast hits to 174 proteins in... 0.07 OrthoFinder output from all 47 species
Aop_g11251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11783 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g32015 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Aspi01Gene48487.t1 Aspi01Gene48487 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70208.t1 Aspi01Gene70208 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0121.g046875 No alias not classified & original description: CDS=185-2353 0.06 OrthoFinder output from all 47 species
Dcu_g20479 No alias not classified & original description: none 0.23 OrthoFinder output from all 47 species
Dcu_g37658 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01032083001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_40431 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07810.1 LOC_Os03g07810 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g56004 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g15515 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g29491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004716 No alias not classified & original description: CDS=158-535 0.03 OrthoFinder output from all 47 species
Solyc01g087080.4.1 Solyc01g087080 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g43079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000549_P002 Zm00001e000549 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038892_P003 Zm00001e038892 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!