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  5. Pnu_g14975

Pnu_g14975


Description : component *(eS19) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g14975

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Msp_g22057 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_28780V3.1 Pp3c1_28780 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_10060V3.1 Pp3c2_10060 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019638 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g34367 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 34 168
No external refs found!