Aliases : AT-TCP20, TCP20, PCF1, ATTCP20
Description : circadian clock activation factor *(TCP20) & original description: none
Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g115586 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15454 | No alias | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os01g69980.1 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g43160.1 | LOC_Os08g43160 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g07480.1 | LOC_Os12g07480 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g06765 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo441321 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g020670.1.1 | Solyc11g020670 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023066_P001 | Zm00001e023066 | transcription factor (TCP). CHE circadian clock repression factor | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
CC | GO:0000145 | exocyst | IEP | HCCA |
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR017887 | TF_TCP_subgr | 116 | 234 |
No external refs found! |