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  5. Als_g46122

Als_g46122


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g46122
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00133270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aob_g05319 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.02 OrthoFinder output from all 47 species
Aob_g31765 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g12443 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01012873001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01022110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os08g14320.1 LOC_Os08g14320 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022510 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g22567 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e013672_P001 Zm00001e013672 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 76 118
No external refs found!