Als_g45583 (RPS11-BETA)

Aliases : RPS11-BETA

Description : component *(uS17) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001674_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g45583
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00028310	EMB1080,...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
AT3G48930	EMB1080	Nucleic acid-binding, OB-fold-like protein	0.03	OrthoFinder output from all 47 species
Adi_g021181	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ala_g34347	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71269.t1	RPS11-BETA,...	component *(uS17) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000551.22	EMB1080	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Cre12.g514500	EMB1080	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Dac_g01215	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
LOC_Os04g42380.1	EMB1080, LOC_Os04g42380	component RPS11 of SSU proteome	0.03	OrthoFinder output from all 47 species
Pp3c1_27980V3.1	EMB1080, Pp3c1_27980	Nucleic acid-binding, OB-fold-like protein	0.01	OrthoFinder output from all 47 species
Pp3c2_13690V3.1	EMB1080, Pp3c2_13690	Nucleic acid-binding, OB-fold-like protein	0.01	OrthoFinder output from all 47 species
Pp3s116_30V3.1	EMB1080, Pp3s116_30	Nucleic acid-binding, OB-fold-like protein	0.01	OrthoFinder output from all 47 species
Sam_g04222	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Sam_g12786	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Smo268639	EMB1080	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Solyc12g042080.2.1	Solyc12g042080	component RPS11 of SSU proteome	0.04	OrthoFinder output from all 47 species
Spa_g08091	No alias	component *(uS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008199	ferric iron binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032440	Ribosomal_S11_N	4	72
IPR000266	Ribosomal_S17/S11	74	142

External Links

No external refs found!

Als_g45583 (RPS11-BETA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation