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  5. Als_g43819

Als_g43819


Description : not classified & original description: none


Gene families : OG0006158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g43819
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aob_g20648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10224.t1 Aspi01Gene10224 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene52376.t1 Aspi01Gene52376 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0087.g042317 No alias not classified & original description: CDS=448-2172 0.03 OrthoFinder output from all 47 species
Dcu_g41946 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g51915 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025770 No alias not classified & original description: CDS=1-2355 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!