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  5. Als_g42144

Als_g42144 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : cationic amino acid transporter *(CAT) & original description: none


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g42144
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.01 OrthoFinder output from all 47 species
Aob_g34197 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene12197.t1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene62609.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010170 CAT7 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G039300.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dac_g09146 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34830.1 CAT8, LOC_Os06g34830 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Nbi_g04310 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.09 OrthoFinder output from all 47 species
Ore_g22402 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63432 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039396_P004 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 454 503
IPR002293 AA/rel_permease1 5 412
No external refs found!