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  5. Als_g39207

Als_g39207 (TGA2, AHBP-1B)


Aliases : TGA2, AHBP-1B

Description : NPR1-interactive transcription factor *(TGA) & original description: none


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g39207
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G08320 bZIP21, TGA9 bZIP transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT5G10030 OBF4, TGA4 TGACG motif-binding factor 4 0.03 OrthoFinder output from all 47 species
Adi_g107228 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Aev_g18385 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40127 PAN NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Aev_g43284 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G057300.1 TGA2, AHBP-1B,... NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G009100.1 TGA2, AHBP-1B,... NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Dde_g21289 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036134001 bZIP21, TGA9 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10150.1 bZIP21, TGA9,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_130907g0010 bZIP21, TGA9 transcription factor (bZIP). transcription factor (TGA).... 0.03 OrthoFinder output from all 47 species
Pnu_g09046 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16925 No alias NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Solyc11g068370.3.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
Spa_g29437 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006810_P004 OBF4, TGA4,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species
Zm00001e014085_P001 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species
Zm00001e028691_P001 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 179 211
IPR025422 TGA_domain 263 338
No external refs found!