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  5. Als_g38689

Als_g38689


Description : not classified & original description: none


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38689
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT5G01460 No alias LMBR1-like membrane protein 0.02 OrthoFinder output from all 47 species
Aob_g05206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10078g0020 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g20730.1 No alias LIMR family protein At3g08930 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g11896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g005310.3.1 Solyc09g005310 LIMR family protein At5g01460 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 10 275
IPR006876 LMBR1-like_membr_prot 272 491
No external refs found!