1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g38670

Als_g38670 (VTC2)


Aliases : VTC2

Description : GDP-L-galactose phosphorylase *(VTC2/5) & original description: none


Gene families : OG0002288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002288_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38670
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT4G26850 VTC2 mannose-1-phosphate guanylyltransferase... 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053545 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G057400.1 VTC2, Ceric.23G057400 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g24051 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.05 OrthoFinder output from all 47 species
Msp_g15139 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Pir_g54704 VTC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022513 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Spa_g06923 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!